Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935929.1_cds_XP_016481601.1_72915
CDS Infomation

[gene=LOC107802585] [db_xref=GeneID:107802585] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016481601.1] [location=complement(join(19590..20255,20761..20880,21041..21262,21469..21789,21880..21954))] [gbkey=CDS]
Sequence

ATGGGGAGGAAAGGAAGCTGGTTTTCTTCTGTAAAGAAGGCTCTGAGCCCTGATCCTAAG
GAAAAGGCAGACAAGAAAGCAAGTAAATCAAAGAAGAAATGGTTCGGGAAAGAAAAGCAG
ACGCTCCCCGATTCTTCGACTGTGGTGACCGCCACAGTGTCGCCTCCTCGTCCTGCCCTT
CCTGTGGAAGAGGTCAAATTTGATGAAGTGGAAGAGGAGCAGACGAAACATGCTTATTCG
GTCGCAGTTGCCACAGCTGCTGCTGCTGAAGCTGCTGTTGCAGCTGCCCACGCTGCTGCA
GAGGTTGTTCGATTAACTACAGTGAACCAATTCACTGGCAAATCAAATGAGGAAGTAGCT
GCAATCCGAGTTCAGACTGCCTTCCGAGGTTATCTGGCGAGGAGGGCATTGAAGGCCTTA
AGGGGACTCGTCAGACTCAAATCACTTGTTGATGGACCTACTGCCAAACGACAAACTGCA
AATGCTCTCAAATGCATGCAGACTTCATCTCGTGTTCAATCTCAGATTAGCTCTAGAAGG
ATCAGGATGTTGGAGGAGAACCGAGCTCTCCAGAGGCAGCTTATGCAGAAGCATGCGAAA
GAACTCGAGAGTTTGAGGAGAGGAGAGGAATGGGATGATAGTCTACAATCACAGAAGCAG
GTTGAAGCTAGCTTGCTCAGCAAATATGAAGCTGCAATTAGACGAGAAAGAGCGCTTGCA
TATTCATATTCTCATCAGCAAACCTGGAAAAAATCGTCAAGATCTGCCAATTTGTTATTC
ATGGATCCAACGAATCCTCAGTGGGGTTGGAGCTGGTTAGAGCGGTGGACGGGTGCTAGG
CCTTGGGAAACTCAAAGCTTATCTGAGAAAGAACGTAAAAATGATCAGATGTCTGTTAGA
AGCATGAGCATTACTGGAGGAGAAATTGCCAAGGCGTTTGCCCGTCATCAGCTGAATTCT
GAACTCCCTTCATCACCTACTACTCCTTCGAAGCCAAGAACTTCAGTAACAGCGAGAAAG
CTGAAATCAGCAAGCCCAAGAGTTAGTGCAATAAACCAAGATGATGATGATGCTCGAAGC
ATGTTTAGCTTGCAATCAGAACGGAACAGGAGGCATAGCATTGCAGGGTCATCCATACGA
GATGACGAGAGCTTGGCGAGCTCTCCCTCAGTCCCAAGTTACATGGCCTCTACAAAGTCT
GCAAAAGCAAAAACACGGTTGCAGAGTCCATTGGGCGTAGAGAACGGCACACCAGAAAAG
GGATCGGCAGGGCCTGTGAAGAAGCGGCTATCTTATCCACCTTCACCTGCCCGGCCAAGG
CGACATTCAGGCCCACCAAAGATTAACAACACCTCATTGAACACCTCCATCACTGAGAAT
AATGTGAACGTTGTCATCAACTAA

Peptide Sequence

PEP ID

XP_016481601.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MGRKGSWFSSVKKALSPDPKEKADKKASKSKKKWFGKEKQTLPDSSTVVTATVSPPRPAL
PVEEVKFDEVEEEQTKHAYSVAVATAAAAEAAVAAAHAAAEVVRLTTVNQFTGKSNEEVA
AIRVQTAFRGYLARRALKALRGLVRLKSLVDGPTAKRQTANALKCMQTSSRVQSQISSRR
IRMLEENRALQRQLMQKHAKELESLRRGEEWDDSLQSQKQVEASLLSKYEAAIRRERALA
YSYSHQQTWKKSSRSANLLFMDPTNPQWGWSWLERWTGARPWETQSLSEKERKNDQMSVR
SMSITGGEIAKAFARHQLNSELPSSPTTPSKPRTSVTARKLKSASPRVSAINQDDDDARS
MFSLQSERNRRHSIAGSSIRDDESLASSPSVPSYMASTKSAKAKTRLQSPLGVENGTPEK
GSAGPVKKRLSYPPSPARPRRHSGPPKINNTSLNTSITENNVNVVIN

Transcript Sequence

Gene sequence data has not been registered.